Publications

August 21, 2017 International Conference on Bioinformatics, Computational Biology, and Health Informatics (BCB)

Scalable Genomic Assembly through Parallel de Bruijn Graph Construction for Multiple K-mers

Kanak Mahadik, Christopher Wright, Milind Kulkarni, Saurabh Bagchi, Somali Chaterji

September 26, 2016 In the Proceedings of 35th Symposium on Reliable Distributed Systems (SRDS)

Sirius: Neural Network Based Probabilistic Assertions for Detecting Silent Data Corruption in Parallel Programs

Tara Thomas, Anmol J. Bhattad, Subrata Mitra, Saurabh Bagchi

June 3, 2016 International Conference on Supercomputing (ICS)

SARVAVID: A Domain Specific Language for Developing Scalable Computational Genomics Applications

Kanak Mahadik, Christopher Wright, Jinyi Zhang, Milind Kulkarni, Saurabh Bagchi, Somali Chaterji

May 1, 2016 ACM Transactions on Graphics (presented at SIGGRAPH 2016)

Simit: a Language for Physical Simulation

Fredrik Kjølstad, Shoaib Kamil, Jonathan Ragan-Kelley, David Levin, Shinjiro Sueda, Desai Chen, Etienne Vouga, Danny Kaufman, Gurtej Kanwar, Wojciech Matusik, Saman Amarasinghe

April 18, 2016 In Proceedings of the Eleventh European Conference on Computer Systems (Eurosys-2016)

Partial-parallel-repair (PPR): a distributed technique for repairing erasure coded storage

Subrata Mitra, Rajesh Panta, Moo-Ryong Ra, Saurabh Bagchi

April 4, 2016 2016 IEEE International Conference on Cloud Engineering (IC2E)

Exploring GPU Acceleration of Apache Spark

Dieudonne Manzi, David Tompkins

October 18, 2015 In Proceedings of the 2015 International Conference on Parallel Architecture and Compilation (PACT)

Dealing with the Unknown: Resilience to Prediction Errors

Subrata Mitra, Greg Bronevetsky, Suhas Javagal, Saurabh Bagchi

July 7, 2015 In the Proceedings of International Conference on Autonomic Computing (ICAC)

ICE: An Integrated Configuration Engine for Interference Mitigation in Cloud Services

Amiya K. Maji, Subrata Mitra, Saurabh Bagchi

December 8, 2014 In the Proceedings of the 15th International Middleware Conference (Middleware)

Mitigating Interference in Cloud Services by Middleware Reconfiguration

Amiya K. Maji, Subrata Mitra, Bowen Zhou, Saurabh Bagchi, Akshat Verma

November 14, 2014 International Conference for High Performance Computing, Networking, Storage and Analysis (Supercomputing)

Orion: Scaling Genomic Sequence Matching with Fine-Grained Parallelization

Kanak Mahadik, Somali Chaterji, Bowen Zhou, Milind Kulkarni, Saurabh Bagchi